Shimadzu PPSQ Protein Sequence Analysis System is designed to determine the amino acid sequences of proteins and peptides, combining an Edman reaction segment with a high performance liquid chromatography (HPLC). It comes in two variants, the PPSQ-51A equipped with one reactor and the PPSQ-53A equipped with three reactors.
In PPSQ-53A, continuous analysis of amino acid sequences of multiple samples can be performed one after the other. In the Edman reaction part, amino acids are sequentially cleaved and derived from the N-terminus of a protein by performing Edman degradation. As a result, stable PTH-amino acids are produced. PTH-amino acids are injected into HPLC online and analysis is performed. HPLC data is saved on the computer and data processing software is used to process the chromatograms. Amino acid sequence prediction software is then used to identify amino acids and predict sequences.
PPSQ series protein sequencers separate PTH-amino acids isocratically. This improves baseline stability and allows high-sensitivity analysis of PTH-amino acids.
Isocratic sequence analysis provides more stable retention times. Therefore, peaks detected in previous cycles can be cancelled using substation chromatogram processing, making it easier to identify sequences.
A high-sensitivity flow cell enables high-sensitivity detection of PTH-amino acids, which allows for sequential analysis using trace samples.
Protein Sequencer has high analysis stability because it is equipped with a high-performance detector and a solvent delivery pump that provides excellent pumping performance, even in the micro flowrate range, combine to ensure high analysis stability. Because chromatograms with good reproducibility can be obtained, peaks detected in the previous cycle can be canceled by performing differential chromatogram processing. This enables easy identification of PTH-amino acids even from trace samples.